top of page

 

Blog 33 – Aug '15 – To R or not to R

 

 

The answer to this question for most scientists is usually ‘to R’. Which for me, was not the happiest realisation of all time. R* is amazing in its ability to perform nearly any analyses you want it to, but is equally amazing in its ability to frustrate. All analyses are run using computer code - a language I speak with less fluency than French (just read last month’s blog to see my level of French). I recall the first time I used R - it was during my honours and it wasn’t a pretty sight. I spent countless hours just trying load my datasheet in the program only to realise it had some fatal flaws (as mentioned in an earlier blog, this can be as little as a space in one data cell) which took hours to find and rectify. Then I had to reload my data set. Trickier than one might imagine considering I’d done it once already - I had already forgotten how I’d done it in the first place. Fortunately for me, my PhD experiences in R have been more positive. I’ve become a little more fluent at R code (or at least have a bigger vocabulary) and the red error messages that still scream at me from my screen no longer send me into a cowering heap.  I’ve also learnt the power of google - somewhere, sometime, someone else has had a similar problem and often their forum questions have been answered in  English (as opposed to Statistics). So there is a wealth of knowledge out there, as long as you know how to find it. I feel like my statistical abilities have really improved in this PhD but I wanted to improve them more. Hence the collaboration with two academics at l’Université d’Angers in France. These two ecologists, who are well versed in the behavioural ecology of African grazers and the statistical methods commonly used in this field, were interested in my project and keen to help me to analyse the data for one of my papers. So, this seemed like the perfect addition to the conservation biology conference in Montpellier to round out my French working trip.

 

Red, error, red, error - my least favourite French view (a recreation of the constant error messaging - there wasn’t a time that I got errors and actually wanted to capture the moment so I had to recreate the fun!)

 

I’ve now finished the collaboration and returned home with a fully analysed chapter that looks at how the foraging and safety strategies of wildebeest change in times of high risk (after hearing lion roars). ‘Scaring hairy cows’ has been suggested as a possible title thanks to my methods of playing lion roar recordings to my ‘beests. Now home, I am working on writing up the paper ready for submission to a scientific journal. I’ll do this with the continued input of my collaborators and my supervisors. For those of you unfamiliar with the scientific publication game - the time between submission to the journal* and actual publication can range from months to well over a year, depending on the number of rejections, complexity of suggested edits and in some cases how long it takes to re-analyse the data (when called for by reviewers). The peer-review publication process is an interesting process that is never void of controversies. Scientists have been found ‘reviewing’ their own work under fake names, Maggie Simpson is a published scientist and an article written with only the words “Get me off your f***ing mailing list” has even been published in a ‘peer-reviewed’ journal. But, by and large, it is a process that is accepted across the scientific, including medical, community (if you exclude predatory journals, like those that published the latter two articles). It’s just a process that takes a lot of time...unless you want to publish in the quality of journal that lets cartoon-ised, dummy-sucking, 1-year-olds (I’m looking at you Maggie) publish in them.

 

*Better known as ‘journal preference A’, and usually followed by journal preferences B, C, etc until acceptance...

 

A better French outlook, taken on my lunch break

 

The process of writing the ‘Scaring hairy cows’ paper up for publication as well writing a paper from my first chapter will be keeping me busy for the next few months but I’ve also ventured onto the behemoth that is Twitter. It was something that was suggested to me by one of my supervisors prior to my field work and I’ve finally had the internet access and time to be able to get to it. So, I am now one of millions of twits* worldwide spruiking my professional life on the inter-webs. Apparently I was only harnessing the ‘traditional’ markets of professional self-promotion with my website and blog. I needed to enter the new world. Oh, how I long for the old, ‘traditional’ days of websites, blogs and the dawn of fire (these three things seem to be relegated to the same point in time… the olden days).  But anyway, back to the spruiking - you can follow me @r_dannock where I’ll post about my project, link to my latest blogs, tweet my favourite field photos and retweet interesting posts from the conservation biology and animal behaviour worlds. Of course, I wouldn’t be a novice twit without some faux pas along the way, so please feel free to enjoy the faux pas when they happen (laughing permitted, but only for my followers).

 

*Whilst that isn’t the correct term, I am pretty sure it is more accurate than Tweep, Tweeter or a Twiterer…

 

Another pleasing French vista (for more than aesthetic reasons…) and a Sunday perk of collaborating in the Loire Valley

​© Copyright Save The Planet ltd. all rights preserved.

bottom of page